Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 AL513190.1-201ENST00000621254 727 ntBASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 FAM45BP-202ENST00000592932 1624 ntBASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 AC069224.1-201ENST00000566372 1715 ntBASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF11Q9Y3C5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 MIR648-201ENST00000385046 94 ntBASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF11Q9Y3C5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 PRAL-201ENST00000624952 3286 ntBASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 ZNF259P1-201ENST00000407656 1365 ntBASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 AC074386.1-202ENST00000463561 864 ntBASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF11Q9Y3C5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms