Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 AC006001.1-201ENST00000325130 474 ntBASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 AC093433.1-201ENST00000458048 571 ntBASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 U62317.3-201ENST00000608319 855 ntBASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 AC104457.1-201ENST00000401024 814 ntBASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 MAGEA5-201ENST00000446757 942 ntBASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 MIR4321-201ENST00000592276 80 ntBASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 MSTO2P-201ENST00000314835 1709 ntBASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZC3H4Q9UPT8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 ACKR1-201ENST00000368121 1240 ntBASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 FNTAP2-201ENST00000430308 634 ntBASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 CHMP4BP1-201ENST00000556017 588 ntBASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZC3H4Q9UPT8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.35■□□□□ 0.69
ZC3H4Q9UPT8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZC3H4Q9UPT8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms