Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 AC027307.2-201ENST00000591252 911 ntBASIC17.72■□□□□ 0.43
L1RE1Q9UN81 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 AC009093.7-201ENST00000623853 1223 ntBASIC17.72■□□□□ 0.43
L1RE1Q9UN81 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
L1RE1Q9UN81 AL031731.1-201ENST00000642131 2094 ntBASIC17.71■□□□□ 0.43
L1RE1Q9UN81 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 IGHV3-62-201ENST00000520057 340 ntBASIC17.71■□□□□ 0.43
L1RE1Q9UN81 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 KRT8P23-201ENST00000560090 1207 ntBASIC17.71■□□□□ 0.43
L1RE1Q9UN81 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 AC008267.7-201ENST00000624570 1194 ntBASIC17.71■□□□□ 0.43
L1RE1Q9UN81 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
L1RE1Q9UN81 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.71■□□□□ 0.42
L1RE1Q9UN81 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.71■□□□□ 0.42
L1RE1Q9UN81 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
L1RE1Q9UN81 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 GGT4P-201ENST00000623672 1708 ntBASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 KRT18P32-201ENST00000424695 1287 ntBASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 HLA-J-202ENST00000469281 1241 ntBASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AC084121.4-201ENST00000641598 221 ntBASIC17.7■□□□□ 0.42
L1RE1Q9UN81 AF228730.8-201ENST00000642140 221 ntBASIC17.7■□□□□ 0.42
L1RE1Q9UN81 UXT-AS1-201ENST00000590504 1525 ntBASIC17.7■□□□□ 0.42
L1RE1Q9UN81 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.7■□□□□ 0.42
L1RE1Q9UN81 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms