Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA4Q9UN74 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 SPDYE17-201ENST00000412399 783 ntBASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 KLF2P3-201ENST00000451977 1087 ntBASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHA4Q9UN74 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 AC022188.1-201ENST00000620960 1664 ntBASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 EEF1DP4-201ENST00000446006 880 ntBASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 FAM86GP-201ENST00000448322 971 ntBASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 AC125807.1-201ENST00000483097 614 ntBASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 AC067863.1-201ENST00000494933 530 ntBASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHA4Q9UN74 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms