Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 CROCCP1-201ENST00000426910 5675 ntBASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CPNE7Q9UBL6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AC135586.1-201ENST00000539323 574 ntBASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AC044860.1-202ENST00000559481 777 ntBASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AC004233.3-201ENST00000607794 1269 ntBASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AC004840.1-201ENST00000636359 365 ntBASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE7Q9UBL6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CPNE7Q9UBL6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.64■□□□□ 0.1
CPNE7Q9UBL6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.64■□□□□ 0.1
CPNE7Q9UBL6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.64■□□□□ 0.1
CPNE7Q9UBL6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 AC004987.2-201ENST00000395959 1148 ntBASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 SPTLC1P1-201ENST00000447199 261 ntBASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE7Q9UBL6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms