Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NEUROD4Q9HD90 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AC074386.1-202ENST00000463561 864 ntBASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AC017007.3-201ENST00000479865 435 ntBASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AC002347.1-201ENST00000569543 541 ntBASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AC132872.4-202ENST00000622924 2756 ntBASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 AL589702.1-201ENST00000641229 1509 ntBASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NEUROD4Q9HD90 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 YBX2P1-201ENST00000394192 760 ntBASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 LINC02084-201ENST00000606069 1096 ntBASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NEUROD4Q9HD90 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms