Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AC243562.2-201ENST00000561247 970 ntBASIC15.47■□□□□ 0.07
BRF2Q9HAW0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 MTDHP5-201ENST00000598980 586 ntBASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.47■□□□□ 0.07
BRF2Q9HAW0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AP000842.3-202ENST00000569238 1080 ntBASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.46■□□□□ 0.07
BRF2Q9HAW0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
BRF2Q9HAW0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
BRF2Q9HAW0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
BRF2Q9HAW0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
BRF2Q9HAW0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 SPCS2P4-201ENST00000436160 681 ntBASIC15.45■□□□□ 0.06
BRF2Q9HAW0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 AC079140.1-201ENST00000508039 487 ntBASIC15.45■□□□□ 0.06
BRF2Q9HAW0 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 LINC01225-203ENST00000563550 1244 ntBASIC15.45■□□□□ 0.06
BRF2Q9HAW0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 AC134407.2-201ENST00000625089 1978 ntBASIC15.45■□□□□ 0.06
BRF2Q9HAW0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms