Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.33■□□□□ 0.2
VPS11Q9H270 AC008735.5-201ENST00000623544 497 ntBASIC16.33■□□□□ 0.2
VPS11Q9H270 AC005593.1-201ENST00000624894 515 ntBASIC16.33■□□□□ 0.2
VPS11Q9H270 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VPS11Q9H270 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 AP002414.3-201ENST00000589352 1468 ntBASIC16.33■□□□□ 0.2
VPS11Q9H270 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VPS11Q9H270 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS11Q9H270 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VPS11Q9H270 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VPS11Q9H270 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VPS11Q9H270 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS11Q9H270 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VPS11Q9H270 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS11Q9H270 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS11Q9H270 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VPS11Q9H270 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS11Q9H270 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.32■□□□□ 0.2
VPS11Q9H270 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS11Q9H270 AL160237.2-201ENST00000556165 472 ntBASIC16.32■□□□□ 0.2
VPS11Q9H270 AC105339.3-201ENST00000560043 636 ntBASIC16.32■□□□□ 0.2
VPS11Q9H270 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
VPS11Q9H270 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.32■□□□□ 0.2
VPS11Q9H270 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 AC004790.2-201ENST00000623588 572 ntBASIC16.32■□□□□ 0.2
VPS11Q9H270 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VPS11Q9H270 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS11Q9H270 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.31■□□□□ 0.2
VPS11Q9H270 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VPS11Q9H270 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VPS11Q9H270 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
VPS11Q9H270 AC108073.2-201ENST00000464002 357 ntBASIC16.31■□□□□ 0.2
VPS11Q9H270 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS11Q9H270 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS11Q9H270 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms