Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 AL365330.1-201ENST00000607459 531 ntBASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AC092919.2-201ENST00000623631 1645 ntBASIC15□□□□□ -0.01
POLR2J3Q9H1A7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AC004870.1-201ENST00000315132 882 ntBASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AP002469.2-201ENST00000531724 424 ntBASIC15□□□□□ -0.01
POLR2J3Q9H1A7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15□□□□□ -0.01
POLR2J3Q9H1A7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CRYGEP-201ENST00000412192 528 ntBASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AC093724.1-201ENST00000448659 1027 ntBASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AC092910.1-201ENST00000482027 1129 ntBASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 KRT18P34-201ENST00000488218 1270 ntBASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AC093909.1-201ENST00000504731 1122 ntBASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms