Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CYP4F24P-201ENST00000586049 1580 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 TMEM14DP-201ENST00000422205 345 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC007274.1-201ENST00000439805 662 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM207CP-201ENST00000443486 507 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AC020765.3-201ENST00000613051 740 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 5S_rRNA.22-201ENST00000614916 106 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 IGHV3-72-202ENST00000621503 303 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 AP002414.2-201ENST00000591780 3365 ntBASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-3Q9BYR4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms