Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO3Q9BXY4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 SPCS2P4-201ENST00000436160 681 ntBASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO3Q9BXY4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 FAM58CP-201ENST00000435741 640 ntBASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 AP000842.3-202ENST00000569238 1080 ntBASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 REXO1L1P-202ENST00000608646 1974 ntBASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO3Q9BXY4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms