Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 AC093525.9-201ENST00000624961 1746 ntBASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 AC004461.1-201ENST00000412461 403 ntBASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 AC107918.2-201ENST00000530817 355 ntBASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 AL645728.2-201ENST00000641974 660 ntBASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 AC079328.2-201ENST00000561241 3354 ntBASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF4Q9BUZ4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAF4Q9BUZ4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 AC022145.2-201ENST00000598203 171 ntBASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAF4Q9BUZ4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF4Q9BUZ4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms