Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 FAM197Y8-203ENST00000450145 560 ntBASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CXCL1P1-201ENST00000502804 216 ntBASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 AL513480.1-201ENST00000451731 511 ntBASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 MIR4751-201ENST00000578027 74 ntBASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HDHD3Q9BSH5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms