Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC027612.4-201ENST00000605371 583 ntBASIC14.57□□□□□ -0.08
USB1Q9BQ65 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 AC022762.2-201ENST00000600308 1353 ntBASIC14.57□□□□□ -0.08
USB1Q9BQ65 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
USB1Q9BQ65 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
USB1Q9BQ65 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC060834.1-201ENST00000443027 2032 ntBASIC14.56□□□□□ -0.08
USB1Q9BQ65 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 SPDYE7P-202ENST00000420373 878 ntBASIC14.56□□□□□ -0.08
USB1Q9BQ65 KRT18P32-201ENST00000424695 1287 ntBASIC14.56□□□□□ -0.08
USB1Q9BQ65 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 AC027348.2-201ENST00000624375 642 ntBASIC14.56□□□□□ -0.08
USB1Q9BQ65 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
USB1Q9BQ65 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
USB1Q9BQ65 PCDHA14-201ENST00000506751 2298 ntBASIC14.55□□□□□ -0.08
USB1Q9BQ65 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
USB1Q9BQ65 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
USB1Q9BQ65 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.55□□□□□ -0.08
USB1Q9BQ65 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
USB1Q9BQ65 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
USB1Q9BQ65 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms