Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CPNE1Q99829 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CPNE1Q99829 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE1Q99829 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE1Q99829 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE1Q99829 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CPNE1Q99829 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CPNE1Q99829 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE1Q99829 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.18■□□□□ 0.18
CPNE1Q99829 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 PRYP6-201ENST00000514804 343 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CPNE1Q99829 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE1Q99829 AL662844.1-201ENST00000546340 181 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 TMBIM7P-203ENST00000641617 1718 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE1Q99829 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 WASH6P-202ENST00000359512 1437 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 AC025580.3-201ENST00000617932 1424 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CPNE1Q99829 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE1Q99829 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 BCAR1-209ENST00000546196 1340 ntBASIC16.18■□□□□ 0.18
CPNE1Q99829 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE1Q99829 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE1Q99829 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE1Q99829 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CPNE1Q99829 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE1Q99829 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CPNE1Q99829 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CPNE1Q99829 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE1Q99829 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CPNE1Q99829 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CPNE1Q99829 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE1Q99829 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE1Q99829 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CPNE1Q99829 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE1Q99829 AL161645.1-201ENST00000622716 1255 ntBASIC16.17■□□□□ 0.18
CPNE1Q99829 AC004877.2-201ENST00000623941 599 ntBASIC16.17■□□□□ 0.18
CPNE1Q99829 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CPNE1Q99829 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE1Q99829 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE1Q99829 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms