Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC018695.7-201ENST00000624587 2492 ntBASIC13.44□□□□□ -0.26
GAFA1Q96PS6 AC134407.2-201ENST00000625089 1978 ntBASIC13.43□□□□□ -0.26
GAFA1Q96PS6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.43□□□□□ -0.26
GAFA1Q96PS6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GAFA1Q96PS6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 CYP4F24P-201ENST00000586049 1580 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AC010491.1-201ENST00000563101 2797 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AC112504.1-201ENST00000623415 1841 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 MTND6P24-201ENST00000440466 518 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AC092183.1-201ENST00000469884 875 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AL035456.1-201ENST00000456064 1369 ntBASIC13.42□□□□□ -0.26
GAFA1Q96PS6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GAFA1Q96PS6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 TUBB3P1-201ENST00000405796 1332 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms