Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC055876.3-201ENST00000431496 288 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC005498.2-205ENST00000593218 784 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC138649.4-201ENST00000612222 287 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SPDYE12P-201ENST00000618416 771 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 CETN4P-206ENST00000642099 2168 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AL596087.1-201ENST00000400979 1969 ntBASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.66■□□□□ 0.26
RPRD1AQ96P16 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AC097493.3-201ENST00000509725 367 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AC093214.1-201ENST00000511688 1107 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AC027369.6-201ENST00000525520 931 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AL390955.2-201ENST00000603032 514 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AL133215.2-201ENST00000609242 977 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 AL390754.1-201ENST00000619088 582 ntBASIC16.65■□□□□ 0.26
RPRD1AQ96P16 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPRD1AQ96P16 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
RPRD1AQ96P16 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RPRD1AQ96P16 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RPRD1AQ96P16 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 MTHFR-217ENST00000641820 1569 ntBASIC16.64■□□□□ 0.25
RPRD1AQ96P16 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AC092580.3-201ENST00000430932 139 ntBASIC16.64■□□□□ 0.25
RPRD1AQ96P16 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 HLA-V-204ENST00000476601 1289 ntBASIC16.64■□□□□ 0.25
RPRD1AQ96P16 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms