Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AC129492.6-201ENST00000611383 1305 ntBASIC13.95□□□□□ -0.18
CMTM3Q96MX0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AC211429.1-201ENST00000415277 523 ntBASIC13.95□□□□□ -0.18
CMTM3Q96MX0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 DRAXINP1-201ENST00000437611 948 ntBASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AC107918.2-201ENST00000530817 355 ntBASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AC097493.4-201ENST00000641197 219 ntBASIC13.95□□□□□ -0.18
CMTM3Q96MX0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 AL359258.3-201ENST00000622910 2331 ntBASIC13.95□□□□□ -0.18
CMTM3Q96MX0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMTM3Q96MX0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms