Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AL589702.1-201ENST00000641229 1509 ntBASIC14.21□□□□□ -0.13
SPTSSAQ969W0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 FAM86C2P-203ENST00000528684 1004 ntBASIC14.21□□□□□ -0.13
SPTSSAQ969W0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 AC002347.1-201ENST00000569543 541 ntBASIC14.21□□□□□ -0.13
SPTSSAQ969W0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 AC092865.6-201ENST00000642101 219 ntBASIC14.21□□□□□ -0.13
SPTSSAQ969W0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.21□□□□□ -0.13
SPTSSAQ969W0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.21□□□□□ -0.14
SPTSSAQ969W0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.21□□□□□ -0.14
SPTSSAQ969W0 AC010491.1-201ENST00000563101 2797 ntBASIC14.21□□□□□ -0.14
SPTSSAQ969W0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPTSSAQ969W0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.21□□□□□ -0.14
SPTSSAQ969W0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPTSSAQ969W0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 AKAP8P1-201ENST00000434743 1349 ntBASIC14.2□□□□□ -0.14
SPTSSAQ969W0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.2□□□□□ -0.14
SPTSSAQ969W0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 AC040169.1-201ENST00000565382 521 ntBASIC14.2□□□□□ -0.14
SPTSSAQ969W0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SPTSSAQ969W0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms