Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 AC136604.1-201ENST00000418535 575 ntBASIC18.24■□□□□ 0.51
TNFRSF25Q93038 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 AC025678.2-201ENST00000562061 970 ntBASIC18.24■□□□□ 0.51
TNFRSF25Q93038 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TNFRSF25Q93038 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 AC046158.3-201ENST00000624947 2558 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 FO393414.2-201ENST00000405153 598 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 AC092580.3-201ENST00000430932 139 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 HLA-V-204ENST00000476601 1289 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 AC004449.1-201ENST00000564240 433 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 AL138828.2-201ENST00000615812 383 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 PRAL-201ENST00000624952 3286 ntBASIC18.23■□□□□ 0.51
TNFRSF25Q93038 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF25Q93038 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.22■□□□□ 0.51
TNFRSF25Q93038 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms