Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.87□□□□□ -0.19
USP9XQ93008 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.87□□□□□ -0.19
USP9XQ93008 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.87□□□□□ -0.19
USP9XQ93008 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.87□□□□□ -0.19
USP9XQ93008 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.87□□□□□ -0.19
USP9XQ93008 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.87□□□□□ -0.19
USP9XQ93008 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.87□□□□□ -0.19
USP9XQ93008 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.87□□□□□ -0.19
USP9XQ93008 AC141586.1-203ENST00000567242 366 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.87□□□□□ -0.19
USP9XQ93008 AL451050.2-201ENST00000606967 682 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 AC011491.1-203ENST00000637688 543 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
USP9XQ93008 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
USP9XQ93008 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.87□□□□□ -0.19
USP9XQ93008 PP12613-201ENST00000424958 2230 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.86□□□□□ -0.19
USP9XQ93008 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
USP9XQ93008 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
USP9XQ93008 AC023310.1-201ENST00000554836 735 ntBASIC13.86□□□□□ -0.19
USP9XQ93008 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.86□□□□□ -0.19
USP9XQ93008 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
USP9XQ93008 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
USP9XQ93008 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.86□□□□□ -0.19
USP9XQ93008 AL590640.2-201ENST00000457038 527 ntBASIC13.86□□□□□ -0.19
USP9XQ93008 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.86□□□□□ -0.19
USP9XQ93008 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.86□□□□□ -0.19
USP9XQ93008 AC093813.1-201ENST00000605066 256 ntBASIC13.86□□□□□ -0.19
USP9XQ93008 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
USP9XQ93008 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
USP9XQ93008 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.86□□□□□ -0.19
USP9XQ93008 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
USP9XQ93008 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.85□□□□□ -0.19
USP9XQ93008 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
USP9XQ93008 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
USP9XQ93008 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.85□□□□□ -0.19
USP9XQ93008 AC074338.1-201ENST00000416825 156 ntBASIC13.85□□□□□ -0.19
USP9XQ93008 CD8B2-202ENST00000417670 633 ntBASIC13.85□□□□□ -0.19
USP9XQ93008 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.85□□□□□ -0.19
USP9XQ93008 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.85□□□□□ -0.19
USP9XQ93008 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.85□□□□□ -0.19
USP9XQ93008 AC135983.4-201ENST00000564116 1262 ntBASIC13.85□□□□□ -0.19
USP9XQ93008 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.85□□□□□ -0.19
USP9XQ93008 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USP9XQ93008 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USP9XQ93008 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.85□□□□□ -0.19
USP9XQ93008 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.85□□□□□ -0.19
USP9XQ93008 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms