Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.43■□□□□ 0.06
TTC9Q92623 WASH4P-201ENST00000564273 1246 ntBASIC15.43■□□□□ 0.06
TTC9Q92623 MIR4259-201ENST00000584466 101 ntBASIC15.43■□□□□ 0.06
TTC9Q92623 CYP2A7P1-201ENST00000595391 815 ntBASIC15.43■□□□□ 0.06
TTC9Q92623 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.43■□□□□ 0.06
TTC9Q92623 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.43■□□□□ 0.06
TTC9Q92623 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.43■□□□□ 0.06
TTC9Q92623 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TTC9Q92623 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TTC9Q92623 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TTC9Q92623 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TTC9Q92623 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 LINC02228-204ENST00000642115 2962 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TTC9Q92623 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TTC9Q92623 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 FAM8A2P-201ENST00000528813 1142 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 AC135586.1-201ENST00000539323 574 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 CHCHD2P3-201ENST00000603038 451 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 AC008494.3-201ENST00000606615 944 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 SPTSSB-204ENST00000617024 1292 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC9Q92623 AC012183.1-201ENST00000625197 499 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TTC9Q92623 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC9Q92623 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC9Q92623 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC9Q92623 AL391256.1-201ENST00000443260 1855 ntBASIC15.42■□□□□ 0.06
TTC9Q92623 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC9Q92623 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC9Q92623 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC9Q92623 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC9Q92623 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TTC9Q92623 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
TTC9Q92623 FAM86MP-201ENST00000340703 885 ntBASIC15.41■□□□□ 0.06
TTC9Q92623 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
TTC9Q92623 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 AC119751.2-201ENST00000504529 210 ntBASIC15.41■□□□□ 0.06
TTC9Q92623 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC9Q92623 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TTC9Q92623 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TTC9Q92623 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 AC073389.1-201ENST00000595595 795 ntBASIC15.41■□□□□ 0.06
TTC9Q92623 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC9Q92623 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC9Q92623 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC9Q92623 REXO1L6P-201ENST00000603433 1515 ntBASIC15.41■□□□□ 0.06
TTC9Q92623 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC9Q92623 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC9Q92623 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms