Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CASKIN1Q8WXD9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CASKIN1Q8WXD9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.54
CASKIN1Q8WXD9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
CASKIN1Q8WXD9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 APRT-204ENST00000563655 709 ntTSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AR-207ENST00000612010 3896 ntTSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AC022137.2-201ENST00000503482 481 ntBASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CASKIN1Q8WXD9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 AC092658.1-201ENST00000505836 891 ntBASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 KRT90P-201ENST00000549264 1064 ntBASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 MIR4313-201ENST00000580760 101 ntBASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC24.68■■□□□ 1.54
CASKIN1Q8WXD9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 AC069224.1-201ENST00000566372 1715 ntBASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 RPL7P3-201ENST00000441388 714 ntBASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 AC022494.1-201ENST00000466044 728 ntBASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 AP001063.1-201ENST00000568332 529 ntBASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CASKIN1Q8WXD9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 FTH1P14-201ENST00000482930 551 ntBASIC24.66■■□□□ 1.54
CASKIN1Q8WXD9 AC009486.1-201ENST00000569860 813 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms