Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 LINC02447-202ENST00000501888 2146 ntBASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 FAM197Y3-203ENST00000618346 717 ntBASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 AC073439.1-201ENST00000624121 1774 ntBASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF3IP1Q8TDR0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 CDC14C-201ENST00000428251 1719 ntBASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 PRYP6-201ENST00000514804 343 ntBASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 PMS2P7-201ENST00000506558 1336 ntBASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF3IP1Q8TDR0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms