Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST2Q8NFU1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 MIR648-201ENST00000385046 94 ntBASIC17.34■□□□□ 0.37
BEST2Q8NFU1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 AP001282.1-201ENST00000531301 1499 ntBASIC17.34■□□□□ 0.37
BEST2Q8NFU1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 AC092364.2-201ENST00000596710 2692 ntBASIC17.34■□□□□ 0.37
BEST2Q8NFU1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 AC008761.3-201ENST00000624803 892 ntBASIC17.34■□□□□ 0.37
BEST2Q8NFU1 AL033527.5-202ENST00000641632 1098 ntBASIC17.34■□□□□ 0.37
BEST2Q8NFU1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST2Q8NFU1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST2Q8NFU1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 AC009477.1-201ENST00000452936 217 ntBASIC17.33■□□□□ 0.36
BEST2Q8NFU1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 AL512361.1-201ENST00000554200 418 ntBASIC17.33■□□□□ 0.36
BEST2Q8NFU1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 LINC02560-201ENST00000596379 459 ntBASIC17.33■□□□□ 0.36
BEST2Q8NFU1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
BEST2Q8NFU1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 MTHFR-217ENST00000641820 1569 ntBASIC17.32■□□□□ 0.36
BEST2Q8NFU1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 FO393414.2-201ENST00000405153 598 ntBASIC17.32■□□□□ 0.36
BEST2Q8NFU1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms