Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 AC005840.4-201ENST00000541242 2494 ntBASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 LINC00528-201ENST00000600723 2160 ntBASIC14.05□□□□□ -0.16
BEST4Q8NFU0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 BNIP3P18-201ENST00000593976 575 ntBASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 AC015656.1-201ENST00000624209 3578 ntBASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 CICP23-201ENST00000605013 2741 ntBASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BEST4Q8NFU0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 AC069224.1-201ENST00000566372 1715 ntBASIC14.04□□□□□ -0.16
BEST4Q8NFU0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 CICP14-201ENST00000629111 2732 ntBASIC14.04□□□□□ -0.16
BEST4Q8NFU0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 AC097376.2-205ENST00000610159 5334 ntBASIC14.04□□□□□ -0.16
BEST4Q8NFU0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.04□□□□□ -0.16
BEST4Q8NFU0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 AL590326.2-201ENST00000625139 305 ntBASIC14.04□□□□□ -0.16
BEST4Q8NFU0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 KRT18P1-202ENST00000452408 1331 ntBASIC14.04□□□□□ -0.16
BEST4Q8NFU0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms