Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 FOSL1P1-201ENST00000511041 816 ntBASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 AC020765.3-201ENST00000613051 740 ntBASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM1Q8IYB3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 AC126755.1-201ENST00000525846 6405 ntBASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRRM1Q8IYB3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AL592424.1-201ENST00000563624 1536 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AC020658.6-201ENST00000623564 1870 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AP000867.3-201ENST00000524675 377 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 MIR5100-201ENST00000579544 119 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AL355385.1-201ENST00000606123 409 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 PGM5P2-202ENST00000637225 1043 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AL022326.1-202ENST00000641533 845 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 AP005117.1-201ENST00000584346 1413 ntBASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRRM1Q8IYB3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRRM1Q8IYB3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms