Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 MIR648-201ENST00000385046 94 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 MTATP6P19-201ENST00000413797 659 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 SPDYE7P-202ENST00000420373 878 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 AL353705.2-201ENST00000428243 662 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 AL136982.4-201ENST00000437689 1740 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 AC245100.5-201ENST00000452108 331 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 AP001002.2-201ENST00000625137 386 ntBASIC17■□□□□ 0.31
SCUBE3Q8IX30 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCUBE3Q8IX30 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SCUBE3Q8IX30 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 HAUS4P1-201ENST00000406739 1145 ntBASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 SPCS2P1-201ENST00000561636 679 ntBASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms