Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 CNN2P11-201ENST00000429351 262 ntBASIC16.05■□□□□ 0.16
HPS6Q86YV9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 RFPL4AP1-201ENST00000530883 850 ntBASIC16.05■□□□□ 0.16
HPS6Q86YV9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS6Q86YV9 AC006058.4-201ENST00000624016 1670 ntBASIC16.05■□□□□ 0.16
HPS6Q86YV9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
HPS6Q86YV9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 AP002414.1-201ENST00000391405 1147 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 AL645939.2-201ENST00000427340 991 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 CYMP-203ENST00000474680 1263 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 AC096734.2-201ENST00000562054 433 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 AP002472.1-201ENST00000577490 586 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 MIR3197-201ENST00000582241 73 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 AC004817.3-201ENST00000602957 2129 ntBASIC16.04■□□□□ 0.16
HPS6Q86YV9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS6Q86YV9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS6Q86YV9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 AC132938.5-201ENST00000624980 1813 ntBASIC16.03■□□□□ 0.16
HPS6Q86YV9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 AL021920.2-201ENST00000624828 1351 ntBASIC16.03■□□□□ 0.16
HPS6Q86YV9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS6Q86YV9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS6Q86YV9 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms