Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.79■□□□□ 0.28
CCDC25Q86WR0 AC093458.2-201ENST00000623150 629 ntBASIC16.79■□□□□ 0.28
CCDC25Q86WR0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 SSR4P1-203ENST00000599569 2260 ntBASIC16.79■□□□□ 0.28
CCDC25Q86WR0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.78■□□□□ 0.28
CCDC25Q86WR0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 HCG4-201ENST00000418983 998 ntBASIC16.78■□□□□ 0.28
CCDC25Q86WR0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 AL355877.3-201ENST00000622820 899 ntBASIC16.78■□□□□ 0.28
CCDC25Q86WR0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC25Q86WR0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.77■□□□□ 0.28
CCDC25Q86WR0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 MIR1224-201ENST00000408193 85 ntBASIC16.77■□□□□ 0.28
CCDC25Q86WR0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 AC008608.2-201ENST00000606089 416 ntBASIC16.77■□□□□ 0.28
CCDC25Q86WR0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC25Q86WR0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 OR2I1P-209ENST00000641730 5365 ntBASIC16.77■□□□□ 0.27
CCDC25Q86WR0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCDC25Q86WR0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC25Q86WR0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC25Q86WR0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC25Q86WR0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms