Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.36□□□□□ -0.11
RTTNQ86VV8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTTNQ86VV8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 TSPY16P-201ENST00000449843 468 ntBASIC14.35□□□□□ -0.11
RTTNQ86VV8 SPDYE11-202ENST00000450699 704 ntBASIC14.35□□□□□ -0.11
RTTNQ86VV8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 AC243562.1-201ENST00000560672 389 ntBASIC14.35□□□□□ -0.11
RTTNQ86VV8 SPDYE9P-201ENST00000570642 692 ntBASIC14.35□□□□□ -0.11
RTTNQ86VV8 SPDYE10P-202ENST00000612005 668 ntBASIC14.35□□□□□ -0.11
RTTNQ86VV8 SPDYE8P-202ENST00000612377 668 ntBASIC14.35□□□□□ -0.11
RTTNQ86VV8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RTTNQ86VV8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTTNQ86VV8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.34□□□□□ -0.11
RTTNQ86VV8 KRT18P32-201ENST00000424695 1287 ntBASIC14.34□□□□□ -0.11
RTTNQ86VV8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 AC022145.2-201ENST00000598203 171 ntBASIC14.34□□□□□ -0.11
RTTNQ86VV8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 ACTG1P14-201ENST00000446382 1122 ntBASIC14.34□□□□□ -0.11
RTTNQ86VV8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.34□□□□□ -0.11
RTTNQ86VV8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTTNQ86VV8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms