Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 AP000867.4-201ENST00000641616 219 ntBASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.96■□□□□ 0.3
FOXR1Q6PIV2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FOXR1Q6PIV2 AC007292.2-201ENST00000593524 1812 ntBASIC16.96■□□□□ 0.3
FOXR1Q6PIV2 GRK6P1-201ENST00000400595 1711 ntBASIC16.96■□□□□ 0.3
FOXR1Q6PIV2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 AC064836.3-201ENST00000607928 673 ntBASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 AL022326.1-202ENST00000641533 845 ntBASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXR1Q6PIV2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 EGFEM1P-202ENST00000431685 1563 ntBASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AC112504.1-201ENST00000623415 1841 ntBASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AC117489.1-201ENST00000625169 3217 ntBASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AC108751.1-201ENST00000490852 363 ntBASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 AC041040.2-201ENST00000622926 2899 ntBASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXR1Q6PIV2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms