Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GPAA1P2-201ENST00000417923 928 ntBASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AC136604.1-201ENST00000418535 575 ntBASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AC000095.1-201ENST00000603208 874 ntBASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AL139099.5-201ENST00000635274 300 ntBASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AC008687.7-202ENST00000637404 953 ntBASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 C2orf27AP3-201ENST00000434123 579 ntBASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AL354718.3-201ENST00000616414 581 ntBASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 CR382287.1-201ENST00000623954 586 ntBASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 AP001282.1-201ENST00000531301 1499 ntBASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNKSR3Q6P9H4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 GOLGA2P4-201ENST00000441462 777 ntBASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 AL450472.2-201ENST00000603663 1156 ntBASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 AC091271.1-201ENST00000611877 1162 ntBASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.17■□□□□ 0.34
CNKSR3Q6P9H4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms