Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AL596087.1-201ENST00000400979 1969 ntBASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 FOXO1B-201ENST00000504678 1527 ntBASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AC069262.1-201ENST00000539058 672 ntBASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 AC024909.3-201ENST00000611513 2257 ntBASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 FAM86GP-201ENST00000448322 971 ntBASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 RARRES2P9-201ENST00000565168 469 ntBASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC39BQ5VTQ0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms