Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGSNQ5TDP6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LGSNQ5TDP6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.38■□□□□ 0.21
LGSNQ5TDP6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LGSNQ5TDP6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.38■□□□□ 0.21
LGSNQ5TDP6 AC023824.1-201ENST00000562945 2975 ntBASIC16.38■□□□□ 0.21
LGSNQ5TDP6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 TMBIM7P-203ENST00000641617 1718 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 PMS2P4-201ENST00000412466 1052 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 KRT18P27-201ENST00000427733 1299 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 IGHV3-65-201ENST00000523210 341 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AC023157.3-201ENST00000619086 2088 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AC020658.6-201ENST00000623564 1870 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AC099063.4-201ENST00000641099 1602 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LGSNQ5TDP6 AP003680.1-201ENST00000598970 3660 ntBASIC16.37■□□□□ 0.21
LGSNQ5TDP6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 AC073621.1-201ENST00000392730 636 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 MRPL20P1-201ENST00000400819 433 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 TSPY19P-201ENST00000418461 509 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 DUSP5P1-201ENST00000441325 1139 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 TSPY18P-201ENST00000441642 509 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 OR7E14P-202ENST00000530490 1290 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 MIR3909-201ENST00000579518 119 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 SSR4P1-203ENST00000599569 2260 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 PPT1-215ENST00000641471 2368 ntBASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.36■□□□□ 0.21
LGSNQ5TDP6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LGSNQ5TDP6 SBF1P1-201ENST00000444527 5631 ntBASIC16.35■□□□□ 0.21
LGSNQ5TDP6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LGSNQ5TDP6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LGSNQ5TDP6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LGSNQ5TDP6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LGSNQ5TDP6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms