Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 AL691432.1-201ENST00000596308 1422 ntBASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.46■□□□□ 0.39
CBWD3Q5JTY5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CBWD3Q5JTY5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CBWD3Q5JTY5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.46■□□□□ 0.38
CBWD3Q5JTY5 CROCCP1-201ENST00000426910 5675 ntBASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 AC011477.6-201ENST00000604980 1927 ntBASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 BNIP3P1-202ENST00000550043 1585 ntBASIC17.45■□□□□ 0.38
CBWD3Q5JTY5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 ALG1L8P-201ENST00000533887 760 ntBASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 AC004835.2-201ENST00000603762 682 ntBASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 AC134684.3-201ENST00000641758 218 ntBASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 AC018892.3-201ENST00000623986 2499 ntBASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
CBWD3Q5JTY5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 RPS8P6-201ENST00000426177 609 ntBASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.43■□□□□ 0.38
CBWD3Q5JTY5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms