Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 RN7SL399P-201ENST00000471648 279 ntBASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHROOM1Q2M3G4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 RAB43P1-201ENST00000561790 589 ntBASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 MIR6752-201ENST00000618442 71 ntBASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 AL033527.5-201ENST00000641382 801 ntBASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHROOM1Q2M3G4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 AC245100.5-201ENST00000452108 331 ntBASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 RRP7BP-205ENST00000566851 833 ntBASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 AC017083.2-201ENST00000608069 979 ntBASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHROOM1Q2M3G4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms