Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PRAMEP78395 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PRAMEP78395 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.38■□□□□ 0.21
PRAMEP78395 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 AC023274.1-201ENST00000418278 595 ntBASIC16.38■□□□□ 0.21
PRAMEP78395 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.38■□□□□ 0.21
PRAMEP78395 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PRAMEP78395 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.38■□□□□ 0.21
PRAMEP78395 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.38■□□□□ 0.21
PRAMEP78395 KRT18P58-201ENST00000527480 1120 ntBASIC16.38■□□□□ 0.21
PRAMEP78395 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.38■□□□□ 0.21
PRAMEP78395 AC040169.1-201ENST00000565382 521 ntBASIC16.38■□□□□ 0.21
PRAMEP78395 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.38■□□□□ 0.21
PRAMEP78395 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.38■□□□□ 0.21
PRAMEP78395 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PRAMEP78395 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PRAMEP78395 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.38■□□□□ 0.21
PRAMEP78395 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.38■□□□□ 0.21
PRAMEP78395 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 MST1L-201ENST00000442552 2185 ntBASIC16.38■□□□□ 0.21
PRAMEP78395 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.38■□□□□ 0.21
PRAMEP78395 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PRAMEP78395 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PRAMEP78395 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 AC092850.2-201ENST00000623821 2697 ntBASIC16.38■□□□□ 0.21
PRAMEP78395 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEP78395 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEP78395 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PRAMEP78395 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.37■□□□□ 0.21
PRAMEP78395 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEP78395 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 AC022188.1-201ENST00000620960 1664 ntBASIC16.37■□□□□ 0.21
PRAMEP78395 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEP78395 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEP78395 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 MIR648-201ENST00000385046 94 ntBASIC16.37■□□□□ 0.21
PRAMEP78395 RARRES2P8-201ENST00000566335 367 ntBASIC16.37■□□□□ 0.21
PRAMEP78395 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.37■□□□□ 0.21
PRAMEP78395 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.37■□□□□ 0.21
PRAMEP78395 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PRAMEP78395 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 AL603832.2-201ENST00000566195 2125 ntBASIC16.37■□□□□ 0.21
PRAMEP78395 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PRAMEP78395 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRAMEP78395 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PRAMEP78395 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.37■□□□□ 0.21
PRAMEP78395 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEP78395 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEP78395 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PRAMEP78395 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 PRYP6-201ENST00000514804 343 ntBASIC16.36■□□□□ 0.21
PRAMEP78395 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PRAMEP78395 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEP78395 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms