Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN20P56880 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 MTHFR-217ENST00000641820 1569 ntBASIC14.89□□□□□ -0.03
CLDN20P56880 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN20P56880 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLDN20P56880 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN20P56880 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN20P56880 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CLDN20P56880 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 GPAA1P2-202ENST00000606848 1787 ntBASIC14.88□□□□□ -0.03
CLDN20P56880 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.88□□□□□ -0.03
CLDN20P56880 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 AL627223.1-201ENST00000416693 442 ntBASIC14.88□□□□□ -0.03
CLDN20P56880 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 LINC01225-203ENST00000563550 1244 ntBASIC14.88□□□□□ -0.03
CLDN20P56880 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN20P56880 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN20P56880 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN20P56880 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN20P56880 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN20P56880 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN20P56880 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN20P56880 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN20P56880 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN20P56880 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.87□□□□□ -0.03
CLDN20P56880 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN20P56880 IGHV3-62-201ENST00000520057 340 ntBASIC14.87□□□□□ -0.03
CLDN20P56880 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN20P56880 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.87□□□□□ -0.03
CLDN20P56880 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
CLDN20P56880 AC027307.2-201ENST00000591252 911 ntBASIC14.87□□□□□ -0.03
CLDN20P56880 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN20P56880 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN20P56880 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN20P56880 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN20P56880 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDN20P56880 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.87□□□□□ -0.03
CLDN20P56880 UXT-AS1-201ENST00000590504 1525 ntBASIC14.87□□□□□ -0.03
CLDN20P56880 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN20P56880 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN20P56880 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms