Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC105021.1-202ENST00000570572 669 ntBASIC12.05□□□□□ -0.48
CMC4P56277 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CMC4P56277 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 FOXO1B-201ENST00000504678 1527 ntBASIC12.05□□□□□ -0.48
CMC4P56277 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 CETN4P-206ENST00000642099 2168 ntBASIC12.05□□□□□ -0.48
CMC4P56277 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.05□□□□□ -0.48
CMC4P56277 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.05□□□□□ -0.48
CMC4P56277 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CMC4P56277 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CMC4P56277 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
CMC4P56277 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 ALOX12P2-203ENST00000570921 1945 ntBASIC12.04□□□□□ -0.48
CMC4P56277 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CMC4P56277 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.04□□□□□ -0.48
CMC4P56277 AC107890.1-201ENST00000422478 521 ntBASIC12.04□□□□□ -0.48
CMC4P56277 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.04□□□□□ -0.48
CMC4P56277 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.04□□□□□ -0.48
CMC4P56277 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 AC069120.2-201ENST00000524091 540 ntBASIC12.04□□□□□ -0.48
CMC4P56277 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.04□□□□□ -0.48
CMC4P56277 MIR4453-201ENST00000584019 89 ntBASIC12.04□□□□□ -0.48
CMC4P56277 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.04□□□□□ -0.48
CMC4P56277 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.04□□□□□ -0.48
CMC4P56277 RN7SL828P-201ENST00000607615 303 ntBASIC12.04□□□□□ -0.48
CMC4P56277 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.04□□□□□ -0.48
CMC4P56277 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
CMC4P56277 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
CMC4P56277 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CMC4P56277 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CMC4P56277 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CMC4P56277 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
CMC4P56277 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 CYP2T1P-202ENST00000641596 2535 ntBASIC12.03□□□□□ -0.48
CMC4P56277 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.03□□□□□ -0.48
CMC4P56277 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CMC4P56277 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.03□□□□□ -0.48
CMC4P56277 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CMC4P56277 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms