Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 AC126177.1-201ENST00000547829 2218 ntBASIC16.72■□□□□ 0.27
NEK3P51956 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.72■□□□□ 0.27
NEK3P51956 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.72■□□□□ 0.27
NEK3P51956 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.72■□□□□ 0.27
NEK3P51956 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.72■□□□□ 0.27
NEK3P51956 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 AC008267.7-201ENST00000624570 1194 ntBASIC16.72■□□□□ 0.27
NEK3P51956 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NEK3P51956 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NEK3P51956 AC144831.1-201ENST00000573312 2656 ntBASIC16.72■□□□□ 0.27
NEK3P51956 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEK3P51956 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
NEK3P51956 LINC02228-204ENST00000642115 2962 ntBASIC16.71■□□□□ 0.27
NEK3P51956 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NEK3P51956 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NEK3P51956 UXT-AS1-201ENST00000590504 1525 ntBASIC16.71■□□□□ 0.27
NEK3P51956 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.71■□□□□ 0.27
NEK3P51956 AC006449.6-201ENST00000612330 2296 ntBASIC16.71■□□□□ 0.27
NEK3P51956 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
NEK3P51956 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NEK3P51956 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NEK3P51956 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.71■□□□□ 0.27
NEK3P51956 CYMP-203ENST00000474680 1263 ntBASIC16.71■□□□□ 0.27
NEK3P51956 KRT18P34-201ENST00000488218 1270 ntBASIC16.71■□□□□ 0.27
NEK3P51956 AC109322.1-201ENST00000524499 1264 ntBASIC16.71■□□□□ 0.27
NEK3P51956 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.71■□□□□ 0.27
NEK3P51956 LINC01225-203ENST00000563550 1244 ntBASIC16.71■□□□□ 0.27
NEK3P51956 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.71■□□□□ 0.27
NEK3P51956 AL355385.1-201ENST00000606123 409 ntBASIC16.71■□□□□ 0.27
NEK3P51956 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.71■□□□□ 0.27
NEK3P51956 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.71■□□□□ 0.27
NEK3P51956 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NEK3P51956 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NEK3P51956 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEK3P51956 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NEK3P51956 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NEK3P51956 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NEK3P51956 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NEK3P51956 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 AL512652.2-201ENST00000625156 1716 ntBASIC16.7■□□□□ 0.26
NEK3P51956 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.7■□□□□ 0.26
NEK3P51956 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NEK3P51956 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NEK3P51956 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.7■□□□□ 0.26
NEK3P51956 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms