Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CENPAP49450 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.77□□□□□ -0.05
CENPAP49450 IGHV3-65-201ENST00000523210 341 ntBASIC14.77□□□□□ -0.05
CENPAP49450 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CENPAP49450 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.77□□□□□ -0.05
CENPAP49450 AC012640.2-201ENST00000561606 901 ntBASIC14.77□□□□□ -0.05
CENPAP49450 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.77□□□□□ -0.05
CENPAP49450 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.77□□□□□ -0.05
CENPAP49450 AC148477.8-201ENST00000624298 468 ntBASIC14.77□□□□□ -0.05
CENPAP49450 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CENPAP49450 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.77□□□□□ -0.05
CENPAP49450 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.77□□□□□ -0.05
CENPAP49450 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CENPAP49450 AL365203.3-201ENST00000609742 2057 ntBASIC14.77□□□□□ -0.05
CENPAP49450 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CENPAP49450 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CENPAP49450 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
CENPAP49450 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.76□□□□□ -0.05
CENPAP49450 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.76□□□□□ -0.05
CENPAP49450 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 AC108073.2-201ENST00000464002 357 ntBASIC14.76□□□□□ -0.05
CENPAP49450 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CENPAP49450 AC010654.1-201ENST00000615722 808 ntBASIC14.76□□□□□ -0.05
CENPAP49450 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 AP003680.1-201ENST00000598970 3660 ntBASIC14.76□□□□□ -0.05
CENPAP49450 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.76□□□□□ -0.05
CENPAP49450 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.76□□□□□ -0.05
CENPAP49450 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CENPAP49450 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.76□□□□□ -0.05
CENPAP49450 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CENPAP49450 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.75□□□□□ -0.05
CENPAP49450 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.75□□□□□ -0.05
CENPAP49450 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 AC079781.3-201ENST00000449110 356 ntBASIC14.75□□□□□ -0.05
CENPAP49450 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.75□□□□□ -0.05
CENPAP49450 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.75□□□□□ -0.05
CENPAP49450 RN7SL510P-201ENST00000581311 263 ntBASIC14.75□□□□□ -0.05
CENPAP49450 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.75□□□□□ -0.05
CENPAP49450 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.75□□□□□ -0.05
CENPAP49450 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CENPAP49450 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.75□□□□□ -0.05
CENPAP49450 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CENPAP49450 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms