Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A2P43004 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SLC1A2P43004 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A2P43004 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A2P43004 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 TFAMP1-201ENST00000412727 736 ntBASIC16.13■□□□□ 0.17
SLC1A2P43004 AL671277.1-201ENST00000429656 993 ntBASIC16.13■□□□□ 0.17
SLC1A2P43004 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A2P43004 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A2P43004 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC1A2P43004 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A2P43004 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A2P43004 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC1A2P43004 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A2P43004 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.13■□□□□ 0.17
SLC1A2P43004 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC1A2P43004 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC1A2P43004 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC1A2P43004 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC1A2P43004 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC1A2P43004 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A2P43004 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 AC011477.6-201ENST00000604980 1927 ntBASIC16.12■□□□□ 0.17
SLC1A2P43004 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SLC1A2P43004 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC1A2P43004 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC1A2P43004 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A2P43004 AC098859.1-201ENST00000502915 1238 ntBASIC16.12■□□□□ 0.17
SLC1A2P43004 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 AC040169.1-201ENST00000565382 521 ntBASIC16.12■□□□□ 0.17
SLC1A2P43004 AC027307.2-201ENST00000591252 911 ntBASIC16.12■□□□□ 0.17
SLC1A2P43004 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A2P43004 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A2P43004 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A2P43004 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A2P43004 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A2P43004 FER1L4-210ENST00000615531 5998 ntBASIC16.12■□□□□ 0.17
SLC1A2P43004 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A2P43004 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A2P43004 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A2P43004 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 AP001282.1-201ENST00000531301 1499 ntBASIC16.11■□□□□ 0.17
SLC1A2P43004 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A2P43004 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A2P43004 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A2P43004 POLD2P1-201ENST00000511220 997 ntBASIC16.11■□□□□ 0.17
SLC1A2P43004 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.11■□□□□ 0.17
SLC1A2P43004 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A2P43004 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A2P43004 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A2P43004 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A2P43004 SPTSSB-204ENST00000617024 1292 ntBASIC16.11■□□□□ 0.17
SLC1A2P43004 AC008267.7-201ENST00000624570 1194 ntBASIC16.11■□□□□ 0.17
SLC1A2P43004 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A2P43004 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms