Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT20P35900 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.47■□□□□ 0.07
KRT20P35900 HLA-J-202ENST00000469281 1241 ntBASIC15.47■□□□□ 0.07
KRT20P35900 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
KRT20P35900 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT20P35900 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT20P35900 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT20P35900 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT20P35900 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.47■□□□□ 0.07
KRT20P35900 AC025580.3-201ENST00000617932 1424 ntBASIC15.47■□□□□ 0.07
KRT20P35900 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.47■□□□□ 0.07
KRT20P35900 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KRT20P35900 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KRT20P35900 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT20P35900 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
KRT20P35900 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT20P35900 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT20P35900 MIR574-201ENST00000385209 96 ntBASIC15.46■□□□□ 0.07
KRT20P35900 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.46■□□□□ 0.07
KRT20P35900 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 AC040169.1-201ENST00000565382 521 ntBASIC15.46■□□□□ 0.07
KRT20P35900 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.46■□□□□ 0.07
KRT20P35900 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
KRT20P35900 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.46■□□□□ 0.07
KRT20P35900 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
KRT20P35900 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
KRT20P35900 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT20P35900 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
KRT20P35900 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT20P35900 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT20P35900 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
KRT20P35900 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
KRT20P35900 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
KRT20P35900 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.45■□□□□ 0.06
KRT20P35900 PMS2P7-201ENST00000506558 1336 ntBASIC15.45■□□□□ 0.06
KRT20P35900 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
KRT20P35900 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT20P35900 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT20P35900 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT20P35900 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.45■□□□□ 0.06
KRT20P35900 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT20P35900 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.45■□□□□ 0.06
KRT20P35900 POLD2P1-201ENST00000511220 997 ntBASIC15.45■□□□□ 0.06
KRT20P35900 KRT19P2-202ENST00000557173 1012 ntBASIC15.45■□□□□ 0.06
KRT20P35900 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT20P35900 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
KRT20P35900 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 AL596087.1-201ENST00000400979 1969 ntBASIC15.45■□□□□ 0.06
KRT20P35900 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT20P35900 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms