Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 DRD5P1-201ENST00000456605 1438 ntBASIC21.5■■□□□ 1.03
USP6P35125 AC006449.6-201ENST00000612330 2296 ntBASIC21.5■■□□□ 1.03
USP6P35125 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
USP6P35125 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.5■■□□□ 1.03
USP6P35125 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.5■■□□□ 1.03
USP6P35125 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
USP6P35125 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
USP6P35125 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6P35125 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USP6P35125 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
USP6P35125 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USP6P35125 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
USP6P35125 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.49■■□□□ 1.03
USP6P35125 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.49■■□□□ 1.03
USP6P35125 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.49■■□□□ 1.03
USP6P35125 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
USP6P35125 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.49■■□□□ 1.03
USP6P35125 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 AC012313.1-201ENST00000593393 3059 ntBASIC21.49■■□□□ 1.03
USP6P35125 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.49■■□□□ 1.03
USP6P35125 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 AC134312.5-201ENST00000568031 1313 ntBASIC21.49■■□□□ 1.03
USP6P35125 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USP6P35125 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.49■■□□□ 1.03
USP6P35125 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
USP6P35125 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP6P35125 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
USP6P35125 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 AC018892.3-201ENST00000623986 2499 ntBASIC21.48■■□□□ 1.03
USP6P35125 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6P35125 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6P35125 AC007551.1-201ENST00000457394 519 ntBASIC21.48■■□□□ 1.03
USP6P35125 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6P35125 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.48■■□□□ 1.03
USP6P35125 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC21.48■■□□□ 1.03
USP6P35125 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.48■■□□□ 1.03
USP6P35125 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
USP6P35125 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6P35125 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
USP6P35125 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6P35125 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6P35125 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6P35125 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
USP6P35125 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.47■■□□□ 1.03
USP6P35125 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.47■■□□□ 1.03
USP6P35125 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 FAM21FP-201ENST00000426241 1131 ntBASIC21.47■■□□□ 1.03
USP6P35125 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.47■■□□□ 1.03
USP6P35125 FAM8A2P-201ENST00000528813 1142 ntBASIC21.47■■□□□ 1.03
USP6P35125 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.47■■□□□ 1.03
USP6P35125 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.47■■□□□ 1.03
USP6P35125 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.47■■□□□ 1.03
USP6P35125 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
USP6P35125 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.47■■□□□ 1.03
USP6P35125 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms