Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHRNA3P32297 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNA3P32297 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 CEND1P1-201ENST00000451006 455 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 AL031432.2-201ENST00000566714 459 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 AL928711.1-201ENST00000570165 459 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 AP002472.1-201ENST00000577490 586 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CHRNA3P32297 AC091812.2-201ENST00000619081 385 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHRNA3P32297 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHRNA3P32297 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 AC073347.1-201ENST00000421633 2643 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 AC092919.2-201ENST00000623631 1645 ntBASIC17.1■□□□□ 0.33
CHRNA3P32297 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.1■□□□□ 0.33
CHRNA3P32297 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA3P32297 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA3P32297 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 AP001160.2-201ENST00000596071 487 ntBASIC17.09■□□□□ 0.33
CHRNA3P32297 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.09■□□□□ 0.33
CHRNA3P32297 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CHRNA3P32297 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 AC016027.1-202ENST00000607927 1699 ntBASIC17.09■□□□□ 0.33
CHRNA3P32297 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHRNA3P32297 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHRNA3P32297 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHRNA3P32297 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA3P32297 PRAL-201ENST00000624952 3286 ntBASIC17.08■□□□□ 0.33
CHRNA3P32297 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA3P32297 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CHRNA3P32297 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA3P32297 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA3P32297 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA3P32297 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CHRNA3P32297 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CHRNA3P32297 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHRNA3P32297 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 AC005622.1-201ENST00000636801 1703 ntBASIC17.08■□□□□ 0.32
CHRNA3P32297 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 AP006288.1-201ENST00000446065 395 ntBASIC17.08■□□□□ 0.32
CHRNA3P32297 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNA3P32297 ACTG1P14-201ENST00000446382 1122 ntBASIC17.08■□□□□ 0.32
CHRNA3P32297 DNAJB3-202ENST00000449667 1266 ntBASIC17.08■□□□□ 0.32
CHRNA3P32297 AC092183.1-201ENST00000469884 875 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms