Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC002056.1-201ENST00000395613 760 ntBASIC15.19■□□□□ 0.02
CHMP24386 HMGA1P7-201ENST00000406908 502 ntBASIC15.19■□□□□ 0.02
CHMP24386 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.19■□□□□ 0.02
CHMP24386 AC112191.1-201ENST00000523689 701 ntBASIC15.19■□□□□ 0.02
CHMP24386 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.19■□□□□ 0.02
CHMP24386 AP002472.1-201ENST00000577490 586 ntBASIC15.19■□□□□ 0.02
CHMP24386 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CHMP24386 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP24386 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.19■□□□□ 0.02
CHMP24386 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 LINC02228-204ENST00000642115 2962 ntBASIC15.19■□□□□ 0.02
CHMP24386 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CHMP24386 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CHMP24386 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP24386 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.18■□□□□ 0.02
CHMP24386 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHMP24386 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.18■□□□□ 0.02
CHMP24386 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHMP24386 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 AP006288.1-201ENST00000446065 395 ntBASIC15.18■□□□□ 0.02
CHMP24386 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CHMP24386 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP24386 MIR4492-201ENST00000581627 80 ntBASIC15.18■□□□□ 0.02
CHMP24386 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.18■□□□□ 0.02
CHMP24386 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.18■□□□□ 0.02
CHMP24386 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.18■□□□□ 0.02
CHMP24386 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 SLC22A20-204ENST00000530038 1673 ntBASIC15.18■□□□□ 0.02
CHMP24386 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CHMP24386 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP24386 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.17■□□□□ 0.02
CHMP24386 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 CDC14C-201ENST00000428251 1719 ntBASIC15.17■□□□□ 0.02
CHMP24386 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 ELL2P1-201ENST00000413990 1906 ntBASIC15.17■□□□□ 0.02
CHMP24386 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHMP24386 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.17■□□□□ 0.02
CHMP24386 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 FAM58CP-201ENST00000435741 640 ntBASIC15.17■□□□□ 0.02
CHMP24386 ALG1L5P-201ENST00000482043 771 ntBASIC15.17■□□□□ 0.02
CHMP24386 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.17■□□□□ 0.02
CHMP24386 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.17■□□□□ 0.02
CHMP24386 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.17■□□□□ 0.02
CHMP24386 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP24386 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP24386 AC091812.2-201ENST00000619081 385 ntBASIC15.17■□□□□ 0.02
CHMP24386 AC055717.3-201ENST00000622967 595 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms