Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC079776.2-201ENST00000641154 1609 ntBASIC15.14■□□□□ 0.01
NR4A1P22736 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.13■□□□□ 0.01
NR4A1P22736 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 AC006449.6-201ENST00000612330 2296 ntBASIC15.13■□□□□ 0.01
NR4A1P22736 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.13■□□□□ 0.01
NR4A1P22736 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 AL662844.1-201ENST00000546340 181 ntBASIC15.13■□□□□ 0.01
NR4A1P22736 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.13■□□□□ 0.01
NR4A1P22736 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.13■□□□□ 0.01
NR4A1P22736 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.13■□□□□ 0.01
NR4A1P22736 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 TP73-AS1-207ENST00000624167 988 ntBASIC15.13■□□□□ 0.01
NR4A1P22736 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 AC007686.3-201ENST00000619017 3487 ntBASIC15.13■□□□□ 0.01
NR4A1P22736 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.13■□□□□ 0.01
NR4A1P22736 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NR4A1P22736 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.13■□□□□ 0.01
NR4A1P22736 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
NR4A1P22736 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
NR4A1P22736 SIGLEC16-201ENST00000599858 1437 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NR4A1P22736 AC003669.1-201ENST00000334569 611 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.12■□□□□ 0.01
NR4A1P22736 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 SPDYE21P-201ENST00000413323 827 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 FDX1P1-201ENST00000449115 551 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 AC009078.2-202ENST00000463353 338 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 AF186996.4-201ENST00000467186 377 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.12■□□□□ 0.01
NR4A1P22736 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.12■□□□□ 0.01
NR4A1P22736 AC073592.4-201ENST00000623827 446 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 AC132938.5-201ENST00000624980 1813 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.12■□□□□ 0.01
NR4A1P22736 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 TUBB8P12-201ENST00000308911 1335 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 TUBB7P-202ENST00000428444 1305 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 TUBB8P7-204ENST00000567960 1332 ntBASIC15.12■□□□□ 0.01
NR4A1P22736 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms