Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.26■□□□□ 0.83
ITGB4P16144 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.26■□□□□ 0.83
ITGB4P16144 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.26■□□□□ 0.83
ITGB4P16144 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.26■□□□□ 0.83
ITGB4P16144 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ITGB4P16144 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 AC006001.1-201ENST00000325130 474 ntBASIC20.25■□□□□ 0.83
ITGB4P16144 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 MIR663B-201ENST00000408361 115 ntBASIC20.25■□□□□ 0.83
ITGB4P16144 HSPB1P2-201ENST00000448722 546 ntBASIC20.25■□□□□ 0.83
ITGB4P16144 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.25■□□□□ 0.83
ITGB4P16144 GAPDHP40-201ENST00000505218 1006 ntBASIC20.25■□□□□ 0.83
ITGB4P16144 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ITGB4P16144 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.25■□□□□ 0.83
ITGB4P16144 AP003171.2-201ENST00000528208 925 ntBASIC20.25■□□□□ 0.83
ITGB4P16144 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ITGB4P16144 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ITGB4P16144 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITGB4P16144 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.25■□□□□ 0.83
ITGB4P16144 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ITGB4P16144 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.24■□□□□ 0.83
ITGB4P16144 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 AL591846.1-201ENST00000451736 433 ntBASIC20.24■□□□□ 0.83
ITGB4P16144 RNA5SP423-201ENST00000517127 109 ntBASIC20.24■□□□□ 0.83
ITGB4P16144 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.24■□□□□ 0.83
ITGB4P16144 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ITGB4P16144 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITGB4P16144 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.24■□□□□ 0.83
ITGB4P16144 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 AC092171.3-201ENST00000610122 2651 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 FAM197Y7-201ENST00000432892 766 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 Z93015.1-201ENST00000451718 390 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 KRT18P25-201ENST00000508931 1278 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.23■□□□□ 0.83
ITGB4P16144 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms