Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC130P13994 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC130P13994 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CCDC130P13994 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC130P13994 MIR770-201ENST00000390219 98 ntBASIC17.12■□□□□ 0.33
CCDC130P13994 HMGN1P19-201ENST00000436976 333 ntBASIC17.12■□□□□ 0.33
CCDC130P13994 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC130P13994 AL139010.1-201ENST00000454878 894 ntBASIC17.12■□□□□ 0.33
CCDC130P13994 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 AC093214.1-201ENST00000511688 1107 ntBASIC17.12■□□□□ 0.33
CCDC130P13994 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC130P13994 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC130P13994 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC130P13994 AC026979.3-201ENST00000607315 403 ntBASIC17.12■□□□□ 0.33
CCDC130P13994 AL158211.3-201ENST00000607385 239 ntBASIC17.12■□□□□ 0.33
CCDC130P13994 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC130P13994 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC130P13994 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC130P13994 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC130P13994 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC130P13994 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 CETN4P-206ENST00000642099 2168 ntBASIC17.11■□□□□ 0.33
CCDC130P13994 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC130P13994 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC130P13994 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 AC245100.5-201ENST00000452108 331 ntBASIC17.11■□□□□ 0.33
CCDC130P13994 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 AC027369.6-201ENST00000525520 931 ntBASIC17.11■□□□□ 0.33
CCDC130P13994 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC130P13994 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC130P13994 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC130P13994 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC130P13994 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC130P13994 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC130P13994 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC130P13994 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC130P13994 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.1■□□□□ 0.33
CCDC130P13994 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCDC130P13994 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC130P13994 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 CYP2T1P-202ENST00000641596 2535 ntBASIC17.1■□□□□ 0.33
CCDC130P13994 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC130P13994 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC130P13994 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC130P13994 RPL37AP1-201ENST00000412502 279 ntBASIC17.1■□□□□ 0.33
CCDC130P13994 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC130P13994 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC130P13994 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC130P13994 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC130P13994 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC130P13994 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC130P13994 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC130P13994 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC130P13994 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC130P13994 AL079307.3-201ENST00000556114 283 ntBASIC17.1■□□□□ 0.33
CCDC130P13994 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC130P13994 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms